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A Test Post
A hippocampal neuron. Axon shown in red.
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CA3 Cell Guide
Prominent cell types and structures found in CA3 region of mouse hippocampus. To request early access, email support@eyewire.org. Excitatory Neurons Thorny Pyramidal Neurons These cells are actively under investigation. Neuroglancer link (requires at least View Access through pyr.ai) Athorny Pyramidal Neurons Neuroglancer link Inhibitory Cells Characterized by general lack of spininess. These cells are under…
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Advanced Spelunker Tips and Tricks
This guide is for those who are already familiar with Spelunker basics and are ready to bring their proofreading game up to 11.
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Proofreading repository for the mouse brain
This document will act as an overview and FAQ for all your proofreading needs while in proofreading in one of our mouse brain datasets, which currently include “Minnie” (cortex) and “CA3” (hippocampus). Please read through these documents as a self-guided training, and return to them whenever you need a refresher. Items highlighted in specific colors…
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Welcome to CA3 in the hippocampus!
Seung Lab is pleased to unveil our newest dataset for connectomics research, which may also become our (first) official dataset for Pyr! This isn’t our first time working with a mouse brain, but unlike our recent visual cortex dataset known as Minnie, we’re now diving into the hippocampus, which is the brain’s memory center! This…
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Pyr into the Brain
If you remember how you got to this page, you can thank your hippocampus. This specialized structure deep in the brain is a control hub for a multitude of critical cognitive tasks such as spatial navigation, pattern recognition, and memory formation. It receives input from many parts of the brain and sends output just as…
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Common User Errors in the Minnie Dataset
In this tutorial we’ll go over some common user-created proofreading errors in Minnie. Learning to identify these types of errors can greatly improve your proofreading accuracy! Branch morphology As you’re searching for branch continuations while proofreading, make sure you are taking a holistic view of your cell. While you of course want your EM slides…
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Proofreading 101: Climb into Spelunker
Spelunker is the latest neuroglancer version for proofreading and annotating large electron microscopy datasets, such as the BANC. Whether you’re brand new to proofreading or or need some guidance while getting acquainted with the updated platform, this tutorial will help get going.
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Proofreading Guide: Minnie Dataset
If you are not familiar with the Spelunker interface, or are new to proofreading, please read the Proofreading 101 with Spelunker blog post before proceeding. The Minnie dataset is a 1.18mm x 0.8mm x 0.52mm region of cortex within a mouse brain. This is larger than our entire FlyWire dataset! Though it is still spans…
